Original Literature | Model OverView |
---|---|
Publication
Title
Parallel pathways of virus recognition.
Affiliation
Department of Molecular and Cellular Biology, Harvard University, Cambridge,Massachusetts 02138, USA.
Abstract
Viruses trigger signaling pathways of innate immunity. In this issue, it isshown that the mitochondrial antiviral signaling protein is critical forintracellular detection signaling, but is dispensable for the activation ofinnate immunity via Toll-like receptors.
PMID
16713969
|
Entity
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--
MO000000210
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cso30:i:CC_CellComponent
--
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m181
10
infinite
0
InterPro | IPR000719 |
TRANSPATH | MO000000210 |
--
TRAF6
--
MO000000212
cso30:c:Protein
cso30:i:CC_CellComponent
--
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m183
10
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InterPro | IPR001841 |
TRANSPATH | MO000000212 |
--
IRF-3:IRF-7
--
MO000007694
cso30:c:Protein
cso30:i:CC_CellComponent
--
--
csml-variable:Double
m977
10
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0
InterPro | IPR008984 |
TRANSPATH | MO000007694 |
--
p50:RelA-p65
--
MO000016632
cso30:c:Protein
cso30:i:CC_CellComponent
--
--
csml-variable:Double
m1617
10
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0
TRANSPATH | MO000016632 |
--
TRAF3
--
MO000016963
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m1872
10
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0
InterPro | IPR001841 |
TRANSPATH | MO000016963 |
--
TBK1
--
MO000019331
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m3902
10
infinite
0
InterPro | IPR000719 |
TRANSPATH | MO000019331 |
--
--
e1
cso30:c:EntityBiologicalCompartment
cso30:i:CC_PlasmaMembrane
--
--
--
csml-variable:Double
m1
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0
--
--
e10
cso30:c:EntityBiologicalCompartment
cso30:i:CC_PlasmaMembrane_InternalSideOfPlasmaMembrane_
--
--
--
csml-variable:Double
m10
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0
--
--
e11
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndosomeLumen
--
--
--
csml-variable:Double
m11
0
infinite
0
--
Viral PAMPs
--
e12
cso30:c:Protein
cso30:i:CC_Cytosol
--
--
csml-variable:Double
m12
0
infinite
0
--
Viral PAMPs:TLR3
--
e13
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m13
0
infinite
0
--
Viral PAMPs:TLR3:TRIF
--
e14
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m14
0
infinite
0
--
Viral PAMPs:TLR3:TRIF:TRAF3
--
e15
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m15
0
infinite
0
--
Viral PAMPs:TLR3:TRIF:TRAF6
--
e16
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m16
0
infinite
0
--
TBK1{active}
--
e17
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m17
10
infinite
0
InterPro | IPR000719 |
TRANSPATH | MO000019331 |
--
IKK-alpha:IKK-beta:IKK-gamma{active}
--
e18
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m18
10
infinite
0
InterPro | IPR000719 |
TRANSPATH | MO000000210 |
--
Viral PAMPs
--
e19
cso30:c:Protein
cso30:i:CC_Cytosol
--
csml-variable:Double
m19
0
infinite
0
--
--
e2
cso30:c:EntityBiologicalCompartment
cso30:i:CC_PlasmaMembrane_ExternalSideOfPlasmaMembrane_
--
--
--
csml-variable:Double
m2
0
infinite
0
--
Viral PAMPs:DDX58
--
e20
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m20
0
infinite
0
--
Viral PAMPs:IFIH1
--
e21
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m21
0
infinite
0
--
Viral PAMPs:DDX58:MAVS
--
e22
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m22
0
infinite
0
--
Viral PAMPs:IFIH1:MAVS
--
e23
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m23
0
infinite
0
--
Viral PAMPs:IFIH1:MAVS:TRAF3
--
e24
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m24
0
infinite
0
--
Viral PAMPs:DDX58:MAVS:TRAF3
--
e25
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m25
0
infinite
0
--
Viral PAMPs:TLR7
--
e27
cso30:c:Complex
cso30:i:CC_EndosomeLumen
--
csml-variable:Double
m28
0
infinite
0
--
Viral PAMPs:TLR9
--
e28
cso30:c:Complex
cso30:i:CC_EndosomeLumen
--
csml-variable:Double
m29
0
infinite
0
--
Viral PAMPs:TLR7:MyD88
--
e29
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m30
0
infinite
0
--
--
e3
cso30:c:EntityBiologicalCompartment
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
--
csml-variable:Double
m3
0
infinite
0
--
Viral PAMPs:TLR9:MyD88
--
e30
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m31
0
infinite
0
--
Viral PAMPs:TLR7:MyD88:TRAF3:TRAF6
--
e31
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m32
0
infinite
0
--
Viral PAMPs:TLR9:MyD88:TRAF3:TRAF6
--
e32
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m33
0
infinite
0
--
ATF-2:C-Jun
--
e33
cso30:c:Complex
cso30:i:CC_Cytosol
--
--
csml-variable:Double
m34
0
infinite
0
--
ATF-2:C-Jun{active}
--
e34
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m35
0
infinite
0
--
IRF-3:IRF-7{active}
--
e35
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m36
10
infinite
0
InterPro | IPR008984 |
TRANSPATH | MO000007694 |
--
p50:RelA-p65{active}
--
e36
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m37
10
infinite
0
TRANSPATH | MO000016632 |
--
IRAK1:IKK-alpha
--
e37
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m38
0
infinite
0
--
IRAK1:IKK-alpha{active}
--
e38
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m39
0
infinite
0
--
--
e4
cso30:c:EntityBiologicalCompartment
cso30:i:CC_PlasmaMembrane_InternalSideOfPlasmaMembrane_
--
--
--
csml-variable:Double
m4
0
infinite
0
--
IRF-7:IRF-7{active}
--
e40
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m41
10
infinite
0
InterPro | IPR008984 |
TRANSPATH | MO000007694 |
--
ATF-2:C-Jun{active}
--
e41
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m42
0
infinite
0
--
IRF-3:IRF-7{active}
--
e42
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m43
10
infinite
0
InterPro | IPR008984 |
TRANSPATH | MO000007694 |
--
p50:RelA-p65{active}
--
e43
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m44
10
infinite
0
TRANSPATH | MO000016632 |
--
IRF-7:IRF-7{active}
--
e44
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m45
10
infinite
0
InterPro | IPR008984 |
TRANSPATH | MO000007694 |
--
csml-variable:Double
m46
0
infinite
0
--
IFN-beta:(ATF2:C-Jun):(IRF-3:IRF-7):(p50:RelA-p65):(IRF-7:IRF-7){active}
--
e46
cso30:c:Complex
cso30:i:CC_Nucleoplasm
--
csml-variable:Double
m47
0
infinite
0
--
--
e47
cso30:c:EntityBiologicalCompartment
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
--
csml-variable:Double
m48
0
infinite
0
--
--
e48
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearBody
--
--
--
csml-variable:Double
m49
0
infinite
0
--
--
e49
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Nucleolus
--
--
--
csml-variable:Double
m63
0
infinite
0
--
--
e5
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Endosome
--
--
--
csml-variable:Double
m5
0
infinite
0
--
--
e50
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearEnvelopeLumen
--
--
--
csml-variable:Double
m50
0
infinite
0
--
--
e51
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearPore
--
--
--
csml-variable:Double
m51
0
infinite
0
--
--
e52
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearInnerMembrane
--
--
--
csml-variable:Double
m52
0
infinite
0
--
--
e53
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearLumen
--
--
--
csml-variable:Double
m53
0
infinite
0
--
--
e54
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearOuterMembrane
--
--
--
csml-variable:Double
m54
0
infinite
0
--
--
e55
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Nucleus
--
--
--
csml-variable:Double
m55
0
infinite
0
--
--
e56
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Nucleoplasm
--
--
--
csml-variable:Double
m56
0
infinite
0
--
--
e57
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearBody
--
--
--
csml-variable:Double
m57
0
infinite
0
--
--
e58
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Nucleolus
--
--
--
csml-variable:Double
m58
0
infinite
0
--
--
e59
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearEnvelope
--
--
--
csml-variable:Double
m59
0
infinite
0
--
--
e6
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndosomeMembrane
--
--
--
csml-variable:Double
m6
0
infinite
0
--
--
e60
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Chromatin
--
--
--
csml-variable:Double
m60
0
infinite
0
--
--
e61
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearChromosome
--
--
--
csml-variable:Double
m61
0
infinite
0
--
--
e62
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearCentromere
--
--
--
csml-variable:Double
m62
0
infinite
0
--
--
e63
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Nucleoplasm
--
--
--
csml-variable:Double
m64
0
infinite
0
--
--
e64
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearOuterMembrane
--
--
--
csml-variable:Double
m65
0
infinite
0
--
--
e65
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearPore
--
--
--
csml-variable:Double
m66
0
infinite
0
--
--
e66
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearInnerMembrane
--
--
--
csml-variable:Double
m67
0
infinite
0
--
--
e67
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearEnvelope
--
--
--
csml-variable:Double
m68
0
infinite
0
--
--
e68
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearLumen
--
--
--
csml-variable:Double
m69
0
infinite
0
--
--
e69
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearChromosome
--
--
--
csml-variable:Double
m70
0
infinite
0
--
--
e7
cso30:c:EntityBiologicalCompartment
cso30:i:CC_PlasmaMembrane
--
--
--
csml-variable:Double
m7
0
infinite
0
--
--
e70
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Chromatin
--
--
--
csml-variable:Double
m71
0
infinite
0
--
--
e71
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearCentromere
--
--
--
csml-variable:Double
m72
0
infinite
0
--
--
e72
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearEnvelopeLumen
--
--
--
csml-variable:Double
m73
0
infinite
0
--
--
e73
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Nucleus
--
--
--
csml-variable:Double
m74
0
infinite
0
--
--
e74
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Cell_WithoutCellWall_
--
--
--
csml-variable:Double
m75
0
infinite
0
--
--
e75
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Cytoplasm
--
--
--
csml-variable:Double
m76
0
infinite
0
--
--
e76
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Cytosol
--
--
--
csml-variable:Double
m77
0
infinite
0
--
--
e77
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Cell
--
--
--
csml-variable:Double
m78
0
infinite
0
--
JAK
--
e78
cso30:c:Protein
cso30:i:CC_Cytosol
--
--
csml-variable:Double
m79
0
infinite
0
--
JAK{active}
--
e79
cso30:c:Protein
cso30:i:CC_Cytosol
--
csml-variable:Double
m80
0
infinite
0
--
--
e8
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Cell_WithoutCellWall_
--
--
--
csml-variable:Double
m8
0
infinite
0
--
STAT
--
e80
cso30:c:Protein
cso30:i:CC_Cytosol
--
--
csml-variable:Double
m81
0
infinite
0
--
STAT{active}
--
e81
cso30:c:Protein
cso30:i:CC_Cytosol
--
csml-variable:Double
m82
0
infinite
0
--
ISGs
--
e82
cso30:c:mRNA
cso30:i:CC_Nucleoplasm
--
--
csml-variable:Double
m83
0
infinite
0
--
--
e9
cso30:c:EntityBiologicalCompartment
cso30:i:CC_PlasmaMembrane_ExternalSideOfPlasmaMembrane_
--
--
--
csml-variable:Double
m9
0
infinite
0
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c1 : 1
stoichiometry:c2 : 1
stoichiometry:c3 : 1
m12*m3965*0.1
nodelay
--
0
PMID: 16713969 Figure1 PMID: 16713969 Viral PAMPs trigger multiple signaling cascades through Toll-like-receptor-dependent (TLR3, TLR7, and TLR9) and -independent (RIG-I and MDA5) pathways leading to kinase activation through TRAF family members
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c28 : 1
stoichiometry:c29 : 1
stoichiometry:c30 : 1
m21*m68199*0.1
nodelay
--
0
PMID: 16713969 Figure1 PMID: 16713969 TRIF and MyD88 are the adaptors linking TLRs to the TRAF proteins, whereas MAVS links RIG-1 and MDA5 to TRAF3.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c31 : 1
stoichiometry:c32 : 1
stoichiometry:c33 : 1
m23*m1872*0.1
nodelay
--
0
PMID: 16713969 Figure1 PMID: 16713969 TRIF and MyD88 are the adaptors linking TLRs to the TRAF proteins, whereas MAVS links RIG-1 and MDA5 to TRAF3.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c34 : 1
stoichiometry:c35 : 1
stoichiometry:c36 : 1
stoichiometry:c37 : 1
m22*m1872*0.1
nodelay
--
0
PMID: 16713969 Figure1 PMID: 16713969 TRIF and MyD88 are the adaptors linking TLRs to the TRAF proteins, whereas MAVS links RIG-1 and MDA5 to TRAF3.
p5
p13
cso30:i:ME_UnknownActivation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c38 : 1
stoichiometry:c40 : 1
stoichiometry:c39 : 1
m26*m24*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
p5
p14
cso30:i:ME_UnknownActivation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c41 : 1
stoichiometry:c42 : 1
stoichiometry:c43 : 1
m25*m26*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
p5
p15
cso30:i:ME_UnknownActivation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c44 : 1
stoichiometry:c45 : 1
stoichiometry:c46 : 1
m25*m3902*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
p5
p16
cso30:i:ME_UnknownActivation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c47 : 1
stoichiometry:c48 : 1
stoichiometry:c49 : 1
m24*m3902*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
p5
p17
cso30:i:ME_UnknownActivation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c50 : 1
stoichiometry:c51 : 1
stoichiometry:c52 : 1
m25*m181*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
p5
p18
cso30:i:ME_UnknownActivation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c53 : 1
stoichiometry:c54 : 1
stoichiometry:c55 : 1
m24*m181*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c56 : 1
stoichiometry:c57 : 1
stoichiometry:c58 : 1
m19*m19940*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 Viral PAMPs trigger multiple signaling cascades through Toll-like-receptor-dependent (TLR3, TLR7, and TLR9) and -independent (RIG-I and MDA5) pathways leading to kinase activation through TRAF family members
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c5 : 1
stoichiometry:c4 : 1
stoichiometry:c6 : 1
m18998*m13*0.1
nodelay
--
0
PMID: 16713969 Figure1 PMID: 16713969 TRIF and MyD88 are the adaptors linking TLRs to the TRAF proteins, whereas MAVS links RIG-1 and MDA5 to TRAF3.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c59 : 1
stoichiometry:c60 : 1
stoichiometry:c61 : 1
m19*m19828*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 Viral PAMPs trigger multiple signaling cascades through Toll-like-receptor-dependent (TLR3, TLR7, and TLR9) and -independent (RIG-I and MDA5) pathways leading to kinase activation through TRAF family members
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c62 : 1
stoichiometry:c63 : 1
stoichiometry:c64 : 1
m1572*m28*0.1
nodelay
--
0
PMID: 16713969 TRIF and MyD88 are the adaptors linking TLRs to the TRAF proteins, whereas MAVS links RIG-1 and MDA5 to TRAF3.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c65 : 1
stoichiometry:c66 : 1
stoichiometry:c67 : 1
m29*m1572*0.1
nodelay
--
0
PMID: 16713969 TRIF and MyD88 are the adaptors linking TLRs to the TRAF proteins, whereas MAVS links RIG-1 and MDA5 to TRAF3.
p3
p23
cso30:i:ME_Binding
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c68 : 1
stoichiometry:c69 : 1
stoichiometry:c70 : 1
stoichiometry:c71 : 1
m1872*m183*m30*0.1
nodelay
--
0
PMID: 16713969 TRIF and MyD88 are the adaptors linking TLRs to the TRAF proteins, whereas MAVS links RIG-1 and MDA5 to TRAF3.
p3
p24
cso30:i:ME_Binding
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c72 : 1
stoichiometry:c73 : 1
stoichiometry:c74 : 1
stoichiometry:c75 : 1
m1872*m183*m31*0.1
nodelay
--
0
PMID: 16713969 TRIF and MyD88 are the adaptors linking TLRs to the TRAF proteins, whereas MAVS links RIG-1 and MDA5 to TRAF3.
p5
p25
cso30:i:ME_UnknownActivation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c76 : 1
stoichiometry:c77 : 1
stoichiometry:c78 : 1
m18*m1617*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c79 : 1
stoichiometry:c80 : 1
stoichiometry:c81 : 1
m32*m38*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c82 : 1
stoichiometry:c83 : 1
stoichiometry:c84 : 1
m33*m38*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c85 : 1
stoichiometry:c86 : 1
stoichiometry:c87 : 1
m39*m40*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c88 : 1
stoichiometry:c89 : 1
stoichiometry:c90 : 1
m27*m34*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c7 : 1
stoichiometry:c8 : 1
stoichiometry:c9 : 1
m14*0.1
nodelay
--
0
PMID: 16713969 TRIF and MyD88 are the adaptors linking TLRs to the TRAF proteins, whereas MAVS links RIG-1 and MDA5 to TRAF3.
p5
p30
cso30:i:ME_UnknownActivation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c91 : 1
stoichiometry:c92 : 1
stoichiometry:c93 : 1
m17*m977*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c94 : 1
stoichiometry:c95 : 1
m35*0.1
nodelay
--
0
PMID: 16713969 Figure1
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c96 : 1
stoichiometry:c97 : 1
m36*0.1
nodelay
--
0
PMID: 16713969 Figure1
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c98 : 1
stoichiometry:c99 : 1
m37*0.1
nodelay
--
0
PMID: 16713969 Figure1
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c100 : 1
stoichiometry:c101 : 1
m41*0.1
nodelay
--
0
PMID: 16713969 Figure1
p35
p35
cso30:i:ME_DNABinding
cso30:i:CC_Nucleoplasm
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c102 : 1
stoichiometry:c103 : 1
stoichiometry:c104 : 1
stoichiometry:c105 : 1
stoichiometry:c106 : 1
stoichiometry:c107 : 1
m42*m43*m44*m45*m46*0.1
nodelay
--
0
PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site
p36
p36
cso30:i:ME_Transcription
cso30:i:CC_Nucleoplasm
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c108 : 1
stoichiometry:c109 : 1
stoichiometry:c110 : 1
stoichiometry:c111 : 1
stoichiometry:c112 : 1
stoichiometry:c113 : 1
m47*0.1
nodelay
--
0
PMID: 16713969 Coordinated assembly of these factors forms the interferon-beta enhanceosome, which is responsible for the transcriptional induction of this antiviral cytokine.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c114 : 1
stoichiometry:c115 : 1
m93217*0.1
nodelay
--
0
PMID: 16713969 The secreted IFN-beta induces the JAK-STAT signaling pathway in neighboring cells, leading to the activation of a large battery of IFN-stimulated genes (ISGs).
p38
p38
cso30:i:ME_UnknownActivation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c116 : 1
stoichiometry:c117 : 1
stoichiometry:c118 : 1
m1636*m79*0.1
nodelay
--
0
PMID: 16713969 The secreted IFN-beta induces the JAK-STAT signaling pathway in neighboring cells, leading to the activation of a large battery of IFN-stimulated genes (ISGs).
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c119 : 1
stoichiometry:c120 : 1
stoichiometry:c121 : 1
m80*m81*0.1
nodelay
--
0
PMID: 16713969 The secreted IFN-beta induces the JAK-STAT signaling pathway in neighboring cells, leading to the activation of a large battery of IFN-stimulated genes (ISGs).
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c10 : 1
stoichiometry:c11 : 1
stoichiometry:c12 : 1
m14*m183*0.1
nodelay
--
0
PMID: 16713969 TRIF and MyD88 are the adaptors linking TLRs to the TRAF proteins, whereas MAVS links RIG-1 and MDA5 to TRAF3.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c122 : 1
stoichiometry:c123 : 1
m82*0.1
nodelay
--
0
PMID: 16713969 The secreted IFN-beta induces the JAK-STAT signaling pathway in neighboring cells, leading to the activation of a large battery of IFN-stimulated genes (ISGs).
p5
p5
cso30:i:ME_UnknownActivation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c13 : 1
stoichiometry:c14 : 1
stoichiometry:c15 : 1
m15*m3902*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
p5
p6
cso30:i:ME_UnknownActivation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c16 : 1
stoichiometry:c17 : 1
stoichiometry:c18 : 1
m16*m181*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 TRAF-dependent induction of the kinases JNK, IKK-alpha, IKK-beta, IKK-gamma, TBK1, and IRAK1 induce the binding of the transcription factors ATF2-cJun complex, NF-KappaB (p50-p65 complex), IRF3, and IRF7 to sequence specific positive regulatory domains (PRD) located upstream of the interferon-beta start site.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c19 : 1
stoichiometry:c20 : 1
stoichiometry:c21 : 1
m19*m41844*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 Viral PAMPs trigger multiple signaling cascades through Toll-like-receptor-dependent (TLR3, TLR7, and TLR9) and -independent (RIG-I and MDA5) pathways leading to kinase activation through TRAF family members
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c22 : 1
stoichiometry:c23 : 1
stoichiometry:c24 : 1
m19*m76904*0.1
nodelay
--
0
PMID: 16713969 Figure 1 PMID: 16713969 Viral PAMPs trigger multiple signaling cascades through Toll-like-receptor-dependent (TLR3, TLR7, and TLR9) and -independent (RIG-I and MDA5) pathways leading to kinase activation through TRAF family members
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c25 : 1
stoichiometry:c26 : 1
stoichiometry:c27 : 1
m20*m68199*0.1
nodelay
--
0
PMID: 16713969 Figure1 PMID: 16713969 TRIF and MyD88 are the adaptors linking TLRs to the TRAF proteins, whereas MAVS links RIG-1 and MDA5 to TRAF3.
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--