Original Literature | Model OverView |
---|---|
Publication
Title
Nucleic acid-sensing Toll-like receptors: beyond ligand search.
Affiliation
Division of Infectious Genetics, Department of Microbiology and Immunology, TheInstitute of Medical Science, University of Tokyo, Japan.kmiyake@ims.u-tokyo.ac.jp
Abstract
Nucleic acids from microbes were known to be immunogenic for a long time, buttheir sensors have been only recently identified. Two types of sensors,Toll-like receptors (TLR) and the RIG-I-like receptors (RLR), principallyrespond to nucleic acid. Discovery of these sensors have opened basic researchas to how our immune system handles microbial nucleic acids. Recent resultsdemonstrate that functional interaction between pathogen sensors is criticallyinvolved in the extent and type of immune responses. Moreover, responsiveness ofnucleic acid-sensing TLRs is profoundly influenced by molecules associated withTLRs or with nucleic acids. Our understanding of mechanisms by which TLRresponses were controlled would contribute to development of drugs such asimmunostimulatory nucleic acids or small chemicals antagonizing TLRs.
PMID
18321608
|
Entity
IL-12 p40
--
G010657
cso30:c:mRNA
cso30:i:CC_CellComponent
--
csml-variable:Double
m93589
10
infinite
0
TRANSFAC | G010657 |
--
TNF-alpha
--
MO000000289
cso30:c:Protein
cso30:i:CC_CellComponent
--
--
csml-variable:Double
m230
10
infinite
0
InterPro | IPR003636 |
TRANSPATH | MO000000289 |
--
IFN Type I
--
MO000016658
cso30:c:Protein
cso30:i:CC_CellComponent
--
--
csml-variable:Double
m1634
10
infinite
0
TRANSPATH | MO000016658 |
--
CD14
--
MO000018132
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m2828
10
infinite
0
InterPro | IPR001611 |
TRANSPATH | MO000018132 |
--
TLR3
--
MO000019398
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m3965
10
infinite
0
InterPro | IPR000157 |
TRANSPATH | MO000019398 |
--
TLR9
--
MO000042012
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m19828
10
infinite
0
TRANSPATH | MO000042012 |
--
TLR7
--
MO000042126
cso30:c:Protein
cso30:i:CC_CellComponent
--
csml-variable:Double
m19940
10
infinite
0
TRANSPATH | MO000042126 |
--
--
e1
cso30:c:EntityBiologicalCompartment
cso30:i:CC_PlasmaMembrane
--
--
--
csml-variable:Double
m1
0
infinite
0
--
--
e10
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Cytosol
--
--
--
csml-variable:Double
m10
0
infinite
0
--
--
e11
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndosomeMembrane
--
--
--
csml-variable:Double
m11
0
infinite
0
--
--
e12
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Endosome
--
--
--
csml-variable:Double
m12
0
infinite
0
--
TLR1: TLR2
--
e13
cso30:c:Complex
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
csml-variable:Double
m13
0
infinite
0
--
TLR2: TLR6
--
e14
cso30:c:Complex
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
csml-variable:Double
m14
0
infinite
0
--
endosomal ssRNA
--
e15
cso30:c:Rna
cso30:i:CC_Cytosol
--
--
csml-variable:Double
m15
0
infinite
0
--
ssRNA: TLR7
--
e16
cso30:c:Complex
cso30:i:CC_EndosomeLumen
--
--
csml-variable:Double
m16
0
infinite
0
--
csml-variable:Double
m17
0
infinite
0
--
endosomal DNA: TLR9
--
e18
cso30:c:Complex
cso30:i:CC_EndosomeMembrane
--
--
csml-variable:Double
m18
0
infinite
0
--
RIG-1
--
e19
cso30:c:Protein
cso30:i:CC_Cytosol
--
--
csml-variable:Double
m19
0
infinite
0
--
--
e2
cso30:c:EntityBiologicalCompartment
cso30:i:CC_PlasmaMembrane_ExternalSideOfPlasmaMembrane_
--
--
--
csml-variable:Double
m2
0
infinite
0
--
ssRNA: RIG-1
--
e20
cso30:c:Complex
cso30:i:CC_Cytosol
--
--
csml-variable:Double
m20
0
infinite
0
--
ssRNA{cytoplasmic}
--
e21
cso30:c:Rna
cso30:i:CC_Cytosol
--
--
csml-variable:Double
m21
0
infinite
0
--
dsRNA: MDA-5
--
e23
cso30:c:Complex
cso30:i:CC_Cytosol
--
--
csml-variable:Double
m23
0
infinite
0
--
csml-variable:Double
m24
0
infinite
0
--
DNA: DAI
--
e25
cso30:c:Complex
cso30:i:CC_Cytosol
--
--
csml-variable:Double
m25
0
infinite
0
--
microbial membrane lipid
--
e26
cso30:c:Protein
cso30:i:CC_Extracellular
--
csml-variable:Double
m26
0
infinite
0
--
microbial membrane lipid: TLR1: TLR2
--
e27
cso30:c:Complex
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
csml-variable:Double
m27
0
infinite
0
--
microbial membrane lipid: TLR2: TLR6
--
e28
cso30:c:Complex
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
csml-variable:Double
m28
0
infinite
0
--
microbial membrane lipid: TLR4: MD-2
--
e29
cso30:c:Complex
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
csml-variable:Double
m29
0
infinite
0
--
--
e3
cso30:c:EntityBiologicalCompartment
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
--
csml-variable:Double
m3
0
infinite
0
--
microbial nucleic acid
--
e30
cso30:c:SmallMolecule
cso30:i:CC_Extracellular
--
csml-variable:Double
m30
0
infinite
0
--
microbial nucleic acid: TLR3
--
e31
cso30:c:Complex
cso30:i:CC_EndosomeLumen
--
csml-variable:Double
m31
0
infinite
0
--
microbial nucleic acid: TLR7
--
e32
cso30:c:Complex
cso30:i:CC_EndosomeLumen
--
csml-variable:Double
m32
0
infinite
0
--
microbial nucleic acid: TLR8
--
e33
cso30:c:Complex
cso30:i:CC_EndosomeLumen
--
csml-variable:Double
m33
0
infinite
0
--
microbial nucleic acid: TLR9
--
e34
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m34
0
infinite
0
--
cytokine
--
e35
cso30:c:mRNA
cso30:i:CC_Nucleoplasm
--
csml-variable:Double
m35
0
infinite
0
--
Unc93B
--
e36
cso30:c:Protein
cso30:i:CC_EndoplasmicReticulum_Membrane_
--
csml-variable:Double
m36
0
infinite
0
--
Unc93B: TLR3
--
e37
cso30:c:Complex
cso30:i:CC_EndosomeMembrane
--
--
csml-variable:Double
m37
0
infinite
0
--
Unc93B: TLR7
--
e38
cso30:c:Complex
cso30:i:CC_EndosomeLumen
--
--
csml-variable:Double
m38
0
infinite
0
--
Unc93B: TLR9
--
e39
cso30:c:Complex
cso30:i:CC_EndosomeMembrane
--
--
csml-variable:Double
m39
0
infinite
0
--
--
e4
cso30:c:EntityBiologicalCompartment
cso30:i:CC_PlasmaMembrane_InternalSideOfPlasmaMembrane_
--
--
--
csml-variable:Double
m4
0
infinite
0
--
Unc93B: TLR13
--
e40
cso30:c:Complex
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
csml-variable:Double
m40
0
infinite
0
--
--
e41
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndoplasmicReticulum
--
--
--
csml-variable:Double
m41
0
infinite
0
--
--
e42
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndoplasmicReticulumLumen
--
--
--
csml-variable:Double
m42
0
infinite
0
--
--
e43
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndoplasmicReticulum_ExtrinsicToExternalSideOfMembrane_
--
--
--
csml-variable:Double
m43
0
infinite
0
--
--
e44
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndoplasmicReticulum_Membrane_
--
--
--
csml-variable:Double
m44
0
infinite
0
--
--
e45
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndoplasmicReticulum_ExtrinsicToInternalSideOfMembrane_
--
--
--
csml-variable:Double
m45
0
infinite
0
--
--
e46
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndoplasmicReticulum_IntegralToMembrane_
--
--
--
csml-variable:Double
m46
0
infinite
0
--
PRAT4A
--
e48
cso30:c:Protein
cso30:i:CC_Cytosol
--
csml-variable:Double
m48
0
infinite
0
--
csml-variable:Double
m49
0
infinite
0
--
TLR4: MD-2
--
e5
cso30:c:Complex
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
csml-variable:Double
m5
0
infinite
0
--
--
e50
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearEnvelopeLumen
--
--
--
csml-variable:Double
m50
0
infinite
0
--
--
e51
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearPore
--
--
--
csml-variable:Double
m51
0
infinite
0
--
--
e52
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearInnerMembrane
--
--
--
csml-variable:Double
m52
0
infinite
0
--
--
e53
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearLumen
--
--
--
csml-variable:Double
m53
0
infinite
0
--
--
e54
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearOuterMembrane
--
--
--
csml-variable:Double
m54
0
infinite
0
--
--
e55
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Nucleus
--
--
--
csml-variable:Double
m55
0
infinite
0
--
--
e56
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Nucleoplasm
--
--
--
csml-variable:Double
m56
0
infinite
0
--
--
e57
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearBody
--
--
--
csml-variable:Double
m57
0
infinite
0
--
--
e58
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Nucleolus
--
--
--
csml-variable:Double
m58
0
infinite
0
--
--
e59
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearEnvelope
--
--
--
csml-variable:Double
m59
0
infinite
0
--
--
e6
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndosomeLumen
--
--
--
csml-variable:Double
m6
0
infinite
0
--
--
e60
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Chromatin
--
--
--
csml-variable:Double
m60
0
infinite
0
--
--
e61
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearChromosome
--
--
--
csml-variable:Double
m61
0
infinite
0
--
--
e62
cso30:c:EntityBiologicalCompartment
cso30:i:CC_NuclearCentromere
--
--
--
csml-variable:Double
m62
0
infinite
0
--
PRAT4A
--
e63
cso30:c:mRNA
cso30:i:CC_Nucleoplasm
--
--
csml-variable:Double
m63
0
infinite
0
--
csml-variable:Double
m64
0
infinite
0
--
HGMB: DNA{nuclear}
--
e65
cso30:c:Complex
cso30:i:CC_Nucleoplasm
--
--
csml-variable:Double
m65
0
infinite
0
--
csml-variable:Double
m66
0
infinite
0
--
DNA: BCR
--
e67
cso30:c:Complex
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
csml-variable:Double
m68
0
infinite
0
--
DNA associated autoantigens: TLR9
--
e68
cso30:c:Complex
cso30:i:CC_Cytosol
--
--
csml-variable:Double
m69
0
infinite
0
--
DNA associated autoantigens
--
e69
cso30:c:Protein
cso30:i:CC_Extracellular
--
--
csml-variable:Double
m70
0
infinite
0
--
--
e7
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Cell
--
--
--
csml-variable:Double
m7
0
infinite
0
--
csml-variable:Double
m71
0
infinite
0
--
HGMB1: DNA: TLR9
--
e71
cso30:c:Complex
cso30:i:CC_Cytosol
--
csml-variable:Double
m72
0
infinite
0
--
RNA
--
e72
cso30:c:Rna
cso30:i:CC_Extracellular
--
--
csml-variable:Double
m73
0
infinite
0
--
RNA: BCR
--
e73
cso30:c:Complex
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
csml-variable:Double
m74
0
infinite
0
--
RNA associated autoantigens
--
e74
cso30:c:Protein
cso30:i:CC_Extracellular
--
--
csml-variable:Double
m75
0
infinite
0
--
RNA associated autoantigens: TLR7
--
e75
cso30:c:Complex
cso30:i:CC_Cytosol
--
--
csml-variable:Double
m76
0
infinite
0
--
IFNalpha
--
e76
cso30:c:mRNA
cso30:i:CC_Nucleolus
--
--
csml-variable:Double
m77
0
infinite
0
--
--
e77
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndoplasmicReticulumLumen
--
--
--
csml-variable:Double
m78
0
infinite
0
--
--
e78
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndoplasmicReticulum_IntegralToMembrane_
--
--
--
csml-variable:Double
m79
0
infinite
0
--
--
e79
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndoplasmicReticulum_ExtrinsicToExternalSideOfMembrane_
--
--
--
csml-variable:Double
m80
0
infinite
0
--
--
e8
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Cell_WithoutCellWall_
--
--
--
csml-variable:Double
m8
0
infinite
0
--
--
e80
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndoplasmicReticulum_ExtrinsicToInternalSideOfMembrane_
--
--
--
csml-variable:Double
m81
0
infinite
0
--
--
e81
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndoplasmicReticulum_Membrane_
--
--
--
csml-variable:Double
m82
0
infinite
0
--
--
e82
cso30:c:EntityBiologicalCompartment
cso30:i:CC_EndoplasmicReticulum
--
--
--
csml-variable:Double
m83
0
infinite
0
--
--
e9
cso30:c:EntityBiologicalCompartment
cso30:i:CC_Cytoplasm
--
--
--
csml-variable:Double
m9
0
infinite
0
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c4 : 1
stoichiometry:c5 : 1
stoichiometry:c6 : 1
m19940*m15*0.1
nodelay
--
0
PMID: 18321608, 11095740, 11812998, 11607032 Endosomal ssRNA, dsRNA, and DNA are recognized by TLR7, TLR3, and TLR9, respectively[3], [4] and [5].
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c31 : 1
stoichiometry:c35 : 1
stoichiometry:c39 : 1
m30*m3965*0.1
nodelay
--
0
PMID: 18321608 Cell surface TLRs, including TLR4/MD-2, TLR1/TLR2, and TLR6/TLR2, recognize microbial membrane lipids, whereas TLR3, TLR7/8, and TLR9 reside in intracellular organelles and recognize microbial nucleic acids.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c32 : 1
stoichiometry:c36 : 1
stoichiometry:c43 : 1
m30*m19940*0.1
nodelay
--
0
PMID: 18321608 Cell surface TLRs, including TLR4/MD-2, TLR1/TLR2, and TLR6/TLR2, recognize microbial membrane lipids, whereas TLR3, TLR7/8, and TLR9 reside in intracellular organelles and recognize microbial nucleic acids.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c33 : 1
stoichiometry:c37 : 1
stoichiometry:c41 : 1
m30*m19823*0.1
nodelay
--
0
PMID: 18321608 Cell surface TLRs, including TLR4/MD-2, TLR1/TLR2, and TLR6/TLR2, recognize microbial membrane lipids, whereas TLR3, TLR7/8, and TLR9 reside in intracellular organelles and recognize microbial nucleic acids.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c34 : 1
stoichiometry:c38 : 1
stoichiometry:c42 : 1
m30*m19828*0.1
nodelay
--
0
PMID: 18321608 Cell surface TLRs, including TLR4/MD-2, TLR1/TLR2, and TLR6/TLR2, recognize microbial membrane lipids, whereas TLR3, TLR7/8, and TLR9 reside in intracellular organelles and recognize microbial nucleic acids.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c46 : 1
stoichiometry:c52 : 1
m34*0.1
nodelay
--
0
PMID: 18321608, 15995707 A synergistic relationship between TLR3/4 and TLR7/8/9 has been recently reported in the triggering of IL-12 and other Th1-promoting cytokines by DCs.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c45 : 1
stoichiometry:c51 : 1
m33*0.1
nodelay
--
0
PMID: 18321608, 15995707 A synergistic relationship between TLR3/4 and TLR7/8/9 has been recently reported in the triggering of IL-12 and other Th1-promoting cytokines by DCs.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c44 : 1
stoichiometry:c50 : 1
m32*0.1
nodelay
--
0
PMID: 18321608, 15995707 A synergistic relationship between TLR3/4 and TLR7/8/9 has been recently reported in the triggering of IL-12 and other Th1-promoting cytokines by DCs.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c40 : 1
stoichiometry:c49 : 1
m31*0.1
nodelay
--
0
PMID: 18321608, 15995707 A synergistic relationship between TLR3/4 and TLR7/8/9 has been recently reported in the triggering of IL-12 and other Th1-promoting cytokines by DCs.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c47 : 1
stoichiometry:c53 : 1
m28*0.1
nodelay
--
0
PMID: 18321608, 15995707 A synergistic relationship between TLR3/4 and TLR7/8/9 has been recently reported in the triggering of IL-12 and other Th1-promoting cytokines by DCs.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c48 : 1
stoichiometry:c54 : 1
m29*0.1
nodelay
--
0
PMID: 18321608, 15995707 A synergistic relationship between TLR3/4 and TLR7/8/9 has been recently reported in the triggering of IL-12 and other Th1-promoting cytokines by DCs.
p2
p2
cso30:i:ME_Binding
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c1 : 1
stoichiometry:c2 : 1
stoichiometry:c69 : 1
stoichiometry:c3 : 1
m3965*m119368*m2828*0.1
nodelay
--
0
PMID: 18321608, 11095740, 11812998, 11607032 Endosomal ssRNA, dsRNA, and DNA are recognized by TLR7, TLR3, and TLR9, respectively[3], [4] and [5]. PMID: 18321608, 16473828 Recently, cell surface CD14 was reported to enhance TLR3 response as well by upregulating cellular uptake of dsRNA.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c59 : 1
stoichiometry:c55 : 1
m34*0.1
nodelay
--
0
PMID: 18321608, 15995707 A synergistic relationship between TLR3/4 and TLR7/8/9 has been recently reported in the triggering of IL-12 and other Th1-promoting cytokines by DCs.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c60 : 1
stoichiometry:c56 : 1
m33*0.1
nodelay
--
0
PMID: 18321608, 15995707 A synergistic relationship between TLR3/4 and TLR7/8/9 has been recently reported in the triggering of IL-12 and other Th1-promoting cytokines by DCs.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c61 : 1
stoichiometry:c57 : 1
m32*0.1
nodelay
--
0
PMID: 18321608, 15995707 A synergistic relationship between TLR3/4 and TLR7/8/9 has been recently reported in the triggering of IL-12 and other Th1-promoting cytokines by DCs.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c62 : 1
stoichiometry:c58 : 1
m31*0.1
nodelay
--
0
PMID: 18321608, 15995707 A synergistic relationship between TLR3/4 and TLR7/8/9 has been recently reported in the triggering of IL-12 and other Th1-promoting cytokines by DCs.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c65 : 1
stoichiometry:c63 : 1
m28*0.1
nodelay
--
0
PMID: 18321608, 15995707 A synergistic relationship between TLR3/4 and TLR7/8/9 has been recently reported in the triggering of IL-12 and other Th1-promoting cytokines by DCs.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c66 : 1
stoichiometry:c64 : 1
m29*0.1
nodelay
--
0
PMID: 18321608, 15995707 A synergistic relationship between TLR3/4 and TLR7/8/9 has been recently reported in the triggering of IL-12 and other Th1-promoting cytokines by DCs.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c68 : 1
stoichiometry:c67 : 1
m1634*0.1
nodelay
--
0
PMID: 18321608 Selective regulation by type I IFN of TLR7 expression is likely to contribute to autoantibody production and autoimmunity.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c70 : 1
stoichiometry:c71 : 1
stoichiometry:c74 : 1
m3965*m36*0.1
nodelay
--
0
PMID: 18321608 Unc93B specifically interacts with TLR3, 7, 9, and 13.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c72 : 1
stoichiometry:c77 : 1
stoichiometry:c75 : 1
m36*m19940*0.1
nodelay
--
0
PMID: 18321608 Unc93B specifically interacts with TLR3, 7, 9, and 13.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c73 : 1
stoichiometry:c78 : 1
stoichiometry:c76 : 1
m36*m19828*0.1
nodelay
--
0
PMID: 18321608 Unc93B specifically interacts with TLR3, 7, 9, and 13.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c7 : 1
stoichiometry:c8 : 1
stoichiometry:c9 : 1
m19828*m17*0.1
nodelay
--
0
PMID: 18321608, 11095740, 11812998, 11607032 Endosomal ssRNA, dsRNA, and DNA are recognized by TLR7, TLR3, and TLR9, respectively[3], [4] and [5].
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c79 : 1
stoichiometry:c80 : 1
stoichiometry:c81 : 1
m36*m19948*0.1
nodelay
--
0
PMID: 18321608 Unc93B specifically interacts with TLR3, 7, 9, and 13.
p31
p31
cso30:i:ME_Translation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c83 : 1
stoichiometry:c86 : 1
stoichiometry:c82 : 1
m93614*m48*0.1
nodelay
--
0
PMID: 18321608 Cell surface expression of TLR4 was apparently downregulated by PRAT4A knockdown, demonstrating that PRAT4A serves as a chaperone for TLR4.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c84 : 1
stoichiometry:c87 : 1
stoichiometry:c85 : 1
m47*m48*0.1
nodelay
--
0
PMID: 18321608, 17998391, 14716310 TLR9 resides in the ER and traffics to endosome/lysosome for ligand recognition [22]. TLR9 in PRAT4A-silenced cells is unable to traffic to endosome/lysosome.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c89 : 1
stoichiometry:c88 : 1
1.0*0.1
nodelay
--
0
PMID: 18321608 Interestingly, expression of PRAT4A mRNA in bone marrow-derived dendritic cells is downregulated by stimulation with TLR ligands such as lipid A.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c90 : 1
stoichiometry:c91 : 1
stoichiometry:c92 : 1
m64*m22603*0.1
nodelay
--
0
PMID: 18321608, 16813837 The high-mobility group box (HMGB) proteins are highly abundant chromatin-binding proteins located mainly in the cell nucleus, where they bind to the minor groove of DNA.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c93 : 1
stoichiometry:c94 : 1
stoichiometry:c95 : 1
m67*m66*0.1
nodelay
--
0
PMID: 18321608, 11948342 DNA and DNA-associated autoantigens activate autoreactive B cells via sequential engagement of the B cell antigen receptor (BCR) and TLR9.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c96 : 1
stoichiometry:c98 : 1
stoichiometry:c97 : 1
m19828*m70*0.1
nodelay
--
0
PMID: 18321608, 11948342 DNA and DNA-associated autoantigens activate autoreactive B cells via sequential engagement of the B cell antigen receptor (BCR) and TLR9.
p37
p37
cso30:i:ME_Binding
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c99 : 1
stoichiometry:c100 : 1
stoichiometry:c101 : 1
m19828*m71*0.1
nodelay
--
0
PMID: 18321608, 17548579 HMGB1 was identified as molecule that binds to a TLR9 ligand CpG. HMGB1 accelerates the delivery of CpG-ODNs to its receptor, leading to a TLR9-dependent augmentation of IL-6, IL-12, and TNFalpha secretion.
p38
p38
cso30:i:ME_Translation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c102 : 1
stoichiometry:c103 : 1
stoichiometry:c104 : 1
m93589*m72*0.1
nodelay
--
0
PMID: 18321608, 17548579 HMGB1 was identified as molecule that binds to a TLR9 ligand CpG. HMGB1 accelerates the delivery of CpG-ODNs to its receptor, leading to a TLR9-dependent augmentation of IL-6, IL-12, and TNFalpha secretion.
p39
p39
cso30:i:ME_Translation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c106 : 1
stoichiometry:c109 : 1
stoichiometry:c105 : 1
m93248*m72*0.1
nodelay
--
0
PMID: 18321608, 17548579 HMGB1 was identified as molecule that binds to a TLR9 ligand CpG. HMGB1 accelerates the delivery of CpG-ODNs to its receptor, leading to a TLR9-dependent augmentation of IL-6, IL-12, and TNFalpha secretion.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c10 : 1
stoichiometry:c11 : 1
stoichiometry:c12 : 1
m19*m21*0.1
nodelay
--
0
PMID: 18321608, 15208624, 17618271, 16625202 Cytoplasmic ssRNA, dsRNA, and DNA are sensed by retinoic acid inducible gene I (RIG-1), melanoma associated gene 5 (MDA5), and DNA-dependent activator of IFN-regulatory factors (DAI), respectively.
p40
p40
cso30:i:ME_Translation
cso30:i:CC_Cytosol
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c108 : 1
stoichiometry:c110 : 1
stoichiometry:c107 : 1
m93309*m72*0.1
nodelay
--
0
PMID: 18321608, 17548579 HMGB1 was identified as molecule that binds to a TLR9 ligand CpG. HMGB1 accelerates the delivery of CpG-ODNs to its receptor, leading to a TLR9-dependent augmentation of IL-6, IL-12, and TNFalpha secretion.
p41
p41
cso30:i:ME_Binding
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c111 : 1
stoichiometry:c112 : 1
stoichiometry:c113 : 1
m73*m67*0.1
nodelay
--
0
PMID: 18321608, 16260486 Similarly, RNA and RNA-associated autoantigens activate B cells by engaging BCR and TLR7.
p42
p42
cso30:i:ME_Binding
cso30:i:CC_PlasmaMembrane_IntegralToPlasmaMembrane_
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c114 : 1
stoichiometry:c115 : 1
stoichiometry:c116 : 1
m75*m19940*0.1
nodelay
--
0
PMID: 18321608, 16260486 Similarly, RNA and RNA-associated autoantigens activate B cells by engaging BCR and TLR7.
PMID: 18321608, 15815647, 16864658 Recent studies have suggested that TLR9 signaling in early endosomes leads to IFN-alpha production by pDCs, whereas TLR9 signaling in late endosomes induces pDC maturation, IL-6 and TNF-alpha secretion.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c118 : 1
stoichiometry:c120 : 1
stoichiometry:c119 : 1
m77*m34*0.1
nodelay
--
0
PMID: 18321608, 15815647, 16864658 Recent studies have suggested that TLR9 signaling in early endosomes leads to IFN-alpha production by pDCs, whereas TLR9 signaling in late endosomes induces pDC maturation, IL-6 and TNF-alpha secretion.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c13 : 1
stoichiometry:c14 : 1
stoichiometry:c15 : 1
m76904*m22*0.1
nodelay
--
0
PMID: 18321608, 15208624, 17618271, 16625202 Cytoplasmic ssRNA, dsRNA, and DNA are sensed by retinoic acid inducible gene I (RIG-1), melanoma associated gene 5 (MDA5), and DNA-dependent activator of IFN-regulatory factors (DAI), respectively.
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c16 : 1
stoichiometry:c17 : 1
stoichiometry:c18 : 1
m24*m36323*0.1
nodelay
--
0
PMID: 18321608, 15208624, 17618271, 16625202 Cytoplasmic ssRNA, dsRNA, and DNA are sensed by retinoic acid inducible gene I (RIG-1), melanoma associated gene 5 (MDA5), and DNA-dependent activator of IFN-regulatory factors (DAI), respectively.
p7
p7
cso30:i:ME_Binding
cso30:i:CC_Extracellular
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c21 : 1
stoichiometry:c26 : 1
stoichiometry:c30 : 1
stoichiometry:c27 : 1
m26*m5*m2828*0.1
nodelay
--
0
PMID: 18321608 Cell surface TLRs, including TLR4/MD-2, TLR1/TLR2, and TLR6/TLR2, recognize microbial membrane lipids, whereas TLR3, TLR7/8, and TLR9 reside in intracellular organelles and recognize microbial nucleic acids. PMID: 18321608 Cell surface CD14 is known to augment cell surface TLRs such as TLR2 and TLR4/MD-2.
p8
p8
cso30:i:ME_Binding
cso30:i:CC_Extracellular
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c20 : 1
stoichiometry:c22 : 1
stoichiometry:c29 : 1
stoichiometry:c23 : 1
m26*m14*m2828*0.1
nodelay
--
0
PMID: 18321608 Cell surface TLRs, including TLR4/MD-2, TLR1/TLR2, and TLR6/TLR2, recognize microbial membrane lipids, whereas TLR3, TLR7/8, and TLR9 reside in intracellular organelles and recognize microbial nucleic acids. PMID: 18321608 Cell surface CD14 is known to augment cell surface TLRs such as TLR2 and TLR4/MD-2.
p9
p9
cso30:i:ME_Binding
cso30:i:CC_Extracellular
--
--
and
mass
coefficient1:0.1
coefficient2:1.0
stoichiometry:c19 : 1
stoichiometry:c24 : 1
stoichiometry:c28 : 1
stoichiometry:c25 : 1
m26*m13*m2828*0.1
nodelay
--
0
PMID: 18321608 Cell surface TLRs, including TLR4/MD-2, TLR1/TLR2, and TLR6/TLR2, recognize microbial membrane lipids, whereas TLR3, TLR7/8, and TLR9 reside in intracellular organelles and recognize microbial nucleic acids. PMID: 18321608 Cell surface CD14 is known to augment cell surface TLRs such as TLR2 and TLR4/MD-2.
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputAssociation
threshold
--
0
1,
--
cso30:c:InputInhibitor
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--
cso30:c:OutputProcess
threshold
--
0
1,
--
cso30:c:InputProcess
threshold
--
0
1,
--